Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FLB_044306-hydroxynicotinate 3-monooxygenase precursor. (452 aa)    
Predicted Functional Partners:
FLB_01330
Methyltransferase domain protein.
  
 0.844
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
  
 0.763
ubiB
Putative protein kinase UbiB.
   
 0.749
FLB_06380
Fatty acid hydroxylase superfamily protein.
   
 0.657
FLB_02160
Hypothetical protein.
   
 0.640
ubiG_1
Ubiquinone biosynthesis O-methyltransferase.
   
 0.640
ubiG_2
Ubiquinone biosynthesis O-methyltransferase.
   
 0.640
pksG
Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG.
   
  
 0.612
FLB_04170
Fatty acid hydroxylase superfamily protein.
   
 0.607
FLB_24750
Hypothetical protein.
   
 0.605
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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