Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acsA | davT_1 | FLB_16840 | FLB_05870 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 5-aminovalerate aminotransferase DavT. | 0.679 |
| acsA | fadN | FLB_16840 | FLB_13730 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Putative 3-hydroxyacyl-CoA dehydrogenase. | 0.972 |
| acsA | fumB | FLB_16840 | FLB_20430 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.592 |
| acsA | gltA2 | FLB_16840 | FLB_23870 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Citrate synthase 1; Belongs to the citrate synthase family. | 0.983 |
| acsA | gltB_2 | FLB_16840 | FLB_01200 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Ferredoxin-dependent glutamate synthase 1. | 0.687 |
| acsA | iolA | FLB_16840 | FLB_05840 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Methylmalonate semialdehyde dehydrogenase. | 0.676 |
| acsA | maeB | FLB_16840 | FLB_25760 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | NADP-dependent malic enzyme. | 0.861 |
| bauA | davT_1 | FLB_05830 | FLB_05870 | Beta-alanine--pyruvate aminotransferase. | 5-aminovalerate aminotransferase DavT. | 0.592 |
| bauA | fadN | FLB_05830 | FLB_13730 | Beta-alanine--pyruvate aminotransferase. | Putative 3-hydroxyacyl-CoA dehydrogenase. | 0.746 |
| bauA | gltB_2 | FLB_05830 | FLB_01200 | Beta-alanine--pyruvate aminotransferase. | Ferredoxin-dependent glutamate synthase 1. | 0.757 |
| bauA | iolA | FLB_05830 | FLB_05840 | Beta-alanine--pyruvate aminotransferase. | Methylmalonate semialdehyde dehydrogenase. | 0.721 |
| davT_1 | acsA | FLB_05870 | FLB_16840 | 5-aminovalerate aminotransferase DavT. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.679 |
| davT_1 | bauA | FLB_05870 | FLB_05830 | 5-aminovalerate aminotransferase DavT. | Beta-alanine--pyruvate aminotransferase. | 0.592 |
| davT_1 | fadN | FLB_05870 | FLB_13730 | 5-aminovalerate aminotransferase DavT. | Putative 3-hydroxyacyl-CoA dehydrogenase. | 0.730 |
| davT_1 | gltA2 | FLB_05870 | FLB_23870 | 5-aminovalerate aminotransferase DavT. | Citrate synthase 1; Belongs to the citrate synthase family. | 0.440 |
| davT_1 | gltB_2 | FLB_05870 | FLB_01200 | 5-aminovalerate aminotransferase DavT. | Ferredoxin-dependent glutamate synthase 1. | 0.820 |
| davT_1 | iolA | FLB_05870 | FLB_05840 | 5-aminovalerate aminotransferase DavT. | Methylmalonate semialdehyde dehydrogenase. | 0.680 |
| davT_1 | maeB | FLB_05870 | FLB_25760 | 5-aminovalerate aminotransferase DavT. | NADP-dependent malic enzyme. | 0.489 |
| deoC1 | fadN | FLB_25810 | FLB_13730 | Deoxyribose-phosphate aldolase 1. | Putative 3-hydroxyacyl-CoA dehydrogenase. | 0.467 |
| deoC1 | iolA | FLB_25810 | FLB_05840 | Deoxyribose-phosphate aldolase 1. | Methylmalonate semialdehyde dehydrogenase. | 0.689 |
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