STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asDBifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase. (550 aa)    
Predicted Functional Partners:
aspT
Aspartate/alanine antiporter.
 
    0.924
metX
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
  
 0.859
thrA_2
Bifunctional aspartokinase/homoserine dehydrogenase 1.
  
 0.859
ansA_1
L-asparaginase.
 
  
 0.845
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
 0.827
thrA_1
Bifunctional aspartokinase/homoserine dehydrogenase 1.
  
 0.767
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.748
gcvP
Glycine dehydrogenase; Belongs to the GcvP family.
   
 
 0.730
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.711
gltA2
Citrate synthase 1; Belongs to the citrate synthase family.
  
 
 0.707
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.