STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_07720Endo-1,4-beta-xylanase/feruloyl esterase precursor. (283 aa)    
Predicted Functional Partners:
FLB_09150
Acetyl esterase.
 
  
 0.689
btr
HTH-type transcriptional activator Btr.
       0.578
FLB_07730
Hypothetical protein.
       0.563
FLB_25170
Hypothetical protein.
 
  
 0.540
nqo2
NADH-quinone oxidoreductase subunit 2.
    
 0.449
nqo1
NADH-quinone oxidoreductase subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
  0.429
gltB_1
Glutamate synthase [NADPH] small chain.
   
 
  0.414
pgaC
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
 
  0.409
FLB_16940
Beta-monoglucosyldiacylglycerol synthase.
  
 
  0.409
FLB_07700
Hypothetical protein.
       0.408
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.