STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBProtein TolB. (480 aa)    
Predicted Functional Partners:
FLB_07810
Curli production assembly/transport component CsgG.
 
    0.914
FLB_07800
Curli assembly protein CsgF.
 
     0.911
FLB_07760
Curlin minor subunit CsgB.
 
     0.863
FLB_10550
Outer membrane lipoprotein Omp16 precursor.
  
 0.840
FLB_17470
Hypothetical protein.
    
 
 0.728
FLB_10540
Hypothetical protein.
  
 
 0.689
susC_19
TonB-dependent receptor SusC precursor.
  
 
   0.639
FLB_11170
Hypothetical protein.
   
   0.625
FLB_28380
Hypothetical protein.
   
   0.625
FLB_01640
Hypothetical protein.
  
  0.591
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.