STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copA_1Copper resistance protein A precursor. (756 aa)    
Predicted Functional Partners:
FLB_14190
Hypothetical protein.
  
  
 0.865
FLB_12070
Hypothetical protein.
 
 
 0.856
silP
Silver exporting P-type ATPase.
 
 
 0.843
FLB_12110
Hypothetical protein.
 
     0.841
rpfC_2
Sensory/regulatory protein RpfC.
  
 
 0.807
tatC2
Sec-independent protein translocase protein TatCy; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.763
FLB_12180
RteC protein.
 
     0.747
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 
 0.738
FLB_12150
MerC mercury resistance protein.
 
 
 0.716
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.698
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.