STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_12640Hypothetical protein. (101 aa)    
Predicted Functional Partners:
msrA2
Peptide methionine sulfoxide reductase MsrA 2; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.676
folE_2
GTP cyclohydrolase 1.
       0.645
FLB_25870
Hypothetical protein.
  
     0.592
FLB_18540
Tellurite resistance protein TerB.
  
     0.546
FLB_13290
Cbb3-type cytochrome oxidase component FixQ.
  
     0.542
FLB_15650
Hypothetical protein.
  
     0.535
FLB_21230
Hypothetical protein.
  
     0.534
FLB_01670
Hypothetical protein.
  
     0.531
FLB_08570
CAAX amino terminal protease self- immunity.
  
     0.528
FLB_22550
Divergent AAA domain protein.
  
     0.528
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.