STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_12720Hypothetical protein; Aerotolerance regulator N-terminal. (642 aa)    
Predicted Functional Partners:
FLB_09860
Hypothetical protein.
  
 0.899
FLB_16550
Hypothetical protein.
 
  
 0.797
FLB_12740
Chloroplast import component protein.
 
     0.784
FLB_00370
Hypothetical protein.
 
     0.782
FLB_21980
Hypothetical protein.
  
   
 0.782
FLB_20200
Tetratricopeptide repeat protein.
 
   
 0.776
FLB_05180
Hypothetical protein.
  
     0.773
pyrC
Dihydroorotase.
       0.737
estB_2
Carboxylesterase 2.
       0.658
FLB_28440
Hypothetical protein.
  
     0.593
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.