STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_13560Bacterial leucyl aminopeptidase precursor. (337 aa)    
Predicted Functional Partners:
pepN
Aminopeptidase N.
  
 
 0.546
ptpA_5
Prolyl tripeptidyl peptidase precursor.
  
    0.514
FLB_28160
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.492
cphB
Cyanophycinase; Belongs to the peptidase S51 family.
       0.428
FLB_13550
Glutaryl-7-aminocephalosporanic-acid acylase precursor.
       0.428
cynT
Carbonic anhydrase.
       0.418
FLB_13580
Hypothetical protein.
       0.418
ptpA_4
Prolyl tripeptidyl peptidase precursor.
  
    0.407
rpoE_3
ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.406
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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