STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_14710Hypothetical protein. (73 aa)    
Predicted Functional Partners:
FLB_18470
Hypothetical protein.
  
     0.770
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.750
FLB_04800
Tetratricopeptide repeat protein.
  
     0.697
cca
Multifunctional CCA protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
     0.681
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
 
     0.678
FLB_04890
Hypothetical protein.
  
     0.640
bamA_4
Outer membrane protein assembly factor BamA precursor.
  
     0.633
FLB_27080
Hypothetical protein.
  
     0.621
yocK
General stress protein 16O.
  
     0.618
smc
Chromosome partition protein Smc.
  
     0.612
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.