STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_18700Acyl-protein synthetase, LuxE. (326 aa)    
Predicted Functional Partners:
FLB_12580
acyl-CoA reductase (LuxC).
  
 
  0.877
FLB_18710
Hypothetical protein.
       0.752
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
 
 0.713
queE_1
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
     0.683
wzc
Tyrosine-protein kinase wzc.
    
  0.616
ndx1
Diadenosine hexaphosphate hydrolase; Belongs to the Nudix hydrolase family.
  
     0.572
rocA_2
1-pyrroline-5-carboxylate dehydrogenase.
  
 
  0.553
FLB_22700
Hypothetical protein.
  
     0.537
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.534
FLB_26950
Hypothetical protein.
  
     0.531
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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