STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_19350Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. (132 aa)    
Predicted Functional Partners:
mutB
methylmalonyl-CoA mutase large subunit.
  
 0.988
mutA
methylmalonyl-CoA mutase small subunit.
 
  
 0.984
accD5_2
Putative propionyl-CoA carboxylase beta chain 5.
 
 
 0.971
argK
Putative GTPase ArgK.
    0.964
scpA_1
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.717
FLB_07690
Hypothetical protein.
  
 
 0.717
accD5_1
Putative propionyl-CoA carboxylase beta chain 5.
  
 
 0.689
FLB_19360
Hypothetical protein.
       0.671
FLB_19370
Hypothetical protein.
       0.671
accA1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 
 0.646
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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