STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanMN-acetylneuraminate epimerase precursor. (400 aa)    
Predicted Functional Partners:
nanA
N-acetylneuraminate lyase; Belongs to the DapA family.
 
  
 0.969
axeA1
Acetylxylan esterase precursor.
     0.956
exuT
Hexuronate transporter.
 
    0.922
sglT_1
Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      0.901
FLB_22510
SusD family protein.
 
  
  0.896
ce
Cellobiose 2-epimerase.
 
     0.870
susC_16
TonB-dependent receptor SusC precursor.
 
     0.864
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 
 0.785
sglT_2
Sodium/glucose cotransporter.
     0.781
rpfC_2
Sensory/regulatory protein RpfC.
   
 
 0.696
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.