STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
legGGDP/UDP-N,N'-diacetylbacillosamine 2-epimerase. (367 aa)    
Predicted Functional Partners:
legI_2
N,N'-diacetyllegionaminic acid synthase.
 
 0.985
legF
CMP-N,N'-diacetyllegionaminic acid synthase.
 
  
 0.960
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
 
 0.958
epsN_1
Putative pyridoxal phosphate-dependent aminotransferase EpsN.
 
  
 0.951
pglD
UDP-N-acetylbacillosamine N-acetyltransferase.
  
  0.950
yceM
Putative oxidoreductase YceM.
 
 
 0.927
pglF_2
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
 
 0.913
legI_1
N,N'-diacetyllegionaminic acid synthase.
 
 0.902
wbpA
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.893
cysE
Serine acetyltransferase.
  
 
 0.845
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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