STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malL_1Oligo-1,6-glucosidase. (562 aa)    
Predicted Functional Partners:
mak
Maltokinase.
 
 0.984
malL_2
Oligo-1,6-glucosidase.
 
    
0.765
FLB_25580
Hypothetical protein.
       0.757
steT
Serine/threonine exchanger SteT.
    
 0.732
yhdG_1
Putative amino acid permease YhdG.
    
 0.732
yhdG_2
Putative amino acid permease YhdG.
    
 0.732
FLB_16740
Alpha-xylosidase BoGH31A precursor; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.678
sacC
Levanase precursor.
 
 
 0.649
glgC
Glucose-1-phosphate adenylyltransferase.
  
 
 0.614
susB_1
Glucan 1,4-alpha-glucosidase SusB precursor.
   
 0.610
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.