STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apxIB_2Toxin RTX-I translocation ATP-binding protein. (552 aa)    
Predicted Functional Partners:
FLB_26750
HlyD family secretion protein.
 0.990
FLB_26740
Outer membrane efflux protein.
 
 
 0.970
FLB_26770
Bacterial regulatory protein, tetR family.
 
     0.957
yheI
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI.
   
 
0.832
FLB_06080
Putative multidrug export ATP-binding/permease protein.
   
 
0.832
hlyD
Hemolysin secretion protein D, chromosomal.
  
 0.784
FLB_06210
Putative efflux pump membrane fusion protein.
  
 0.784
macA_2
Macrolide export protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.784
FLB_16190
Hypothetical protein.
  
     0.615
FLB_15990
Hypothetical protein.
  
     0.611
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.