Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH10175.1 | SEH10176.1 | SAMN02745716_0022 | SAMN02745716_0023 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEH10175.1 | SEH10180.1 | SAMN02745716_0022 | SAMN02745716_0027 | Hypothetical protein. | Phosphate transport system permease protein. | 0.515 |
SEH10175.1 | SEH10181.1 | SAMN02745716_0022 | SAMN02745716_0028 | Hypothetical protein. | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.515 |
SEH10175.1 | SEH10182.1 | SAMN02745716_0022 | SAMN02745716_0029 | Hypothetical protein. | Phosphate transport system substrate-binding protein. | 0.409 |
SEH10175.1 | pstB | SAMN02745716_0022 | SAMN02745716_0026 | Hypothetical protein. | Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.661 |
SEH10176.1 | SEH10175.1 | SAMN02745716_0023 | SAMN02745716_0022 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEH10176.1 | SEH10180.1 | SAMN02745716_0023 | SAMN02745716_0027 | Hypothetical protein. | Phosphate transport system permease protein. | 0.519 |
SEH10176.1 | SEH10181.1 | SAMN02745716_0023 | SAMN02745716_0028 | Hypothetical protein. | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.515 |
SEH10176.1 | SEH10182.1 | SAMN02745716_0023 | SAMN02745716_0029 | Hypothetical protein. | Phosphate transport system substrate-binding protein. | 0.409 |
SEH10176.1 | pstB | SAMN02745716_0023 | SAMN02745716_0026 | Hypothetical protein. | Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.664 |
SEH10180.1 | SEH10175.1 | SAMN02745716_0027 | SAMN02745716_0022 | Phosphate transport system permease protein. | Hypothetical protein. | 0.515 |
SEH10180.1 | SEH10176.1 | SAMN02745716_0027 | SAMN02745716_0023 | Phosphate transport system permease protein. | Hypothetical protein. | 0.519 |
SEH10180.1 | SEH10181.1 | SAMN02745716_0027 | SAMN02745716_0028 | Phosphate transport system permease protein. | Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
SEH10180.1 | SEH10182.1 | SAMN02745716_0027 | SAMN02745716_0029 | Phosphate transport system permease protein. | Phosphate transport system substrate-binding protein. | 0.998 |
SEH10180.1 | SEH10688.1 | SAMN02745716_0027 | SAMN02745716_0517 | Phosphate transport system permease protein. | Phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1). | 0.853 |
SEH10180.1 | SEH10691.1 | SAMN02745716_0027 | SAMN02745716_0518 | Phosphate transport system permease protein. | Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.879 |
SEH10180.1 | SEH10695.1 | SAMN02745716_0027 | SAMN02745716_0519 | Phosphate transport system permease protein. | Phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1). | 0.613 |
SEH10180.1 | SEH10701.1 | SAMN02745716_0027 | SAMN02745716_0521 | Phosphate transport system permease protein. | Phosphate transport system protein; Plays a role in the regulation of phosphate uptake. | 0.971 |
SEH10180.1 | pstB | SAMN02745716_0027 | SAMN02745716_0026 | Phosphate transport system permease protein. | Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.997 |
SEH10180.1 | pstB-2 | SAMN02745716_0027 | SAMN02745716_0520 | Phosphate transport system permease protein. | Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.985 |
page 1 of 5