Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH10421.1 | SEH10422.1 | SAMN02745716_0272 | SAMN02745716_0273 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Transcriptional regulator, TetR family. | 0.527 |
SEH10421.1 | SEH10423.1 | SAMN02745716_0272 | SAMN02745716_0274 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.419 |
SEH10421.1 | SEH10424.1 | SAMN02745716_0272 | SAMN02745716_0275 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Predicted nuclease (RNAse H fold). | 0.419 |
SEH10422.1 | SEH10421.1 | SAMN02745716_0273 | SAMN02745716_0272 | Transcriptional regulator, TetR family. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.527 |
SEH10422.1 | SEH10423.1 | SAMN02745716_0273 | SAMN02745716_0274 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.596 |
SEH10422.1 | SEH10424.1 | SAMN02745716_0273 | SAMN02745716_0275 | Transcriptional regulator, TetR family. | Predicted nuclease (RNAse H fold). | 0.596 |
SEH10423.1 | SEH10421.1 | SAMN02745716_0274 | SAMN02745716_0272 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.419 |
SEH10423.1 | SEH10422.1 | SAMN02745716_0274 | SAMN02745716_0273 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.596 |
SEH10423.1 | SEH10424.1 | SAMN02745716_0274 | SAMN02745716_0275 | Hypothetical protein. | Predicted nuclease (RNAse H fold). | 0.773 |
SEH10424.1 | SEH10421.1 | SAMN02745716_0275 | SAMN02745716_0272 | Predicted nuclease (RNAse H fold). | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.419 |
SEH10424.1 | SEH10422.1 | SAMN02745716_0275 | SAMN02745716_0273 | Predicted nuclease (RNAse H fold). | Transcriptional regulator, TetR family. | 0.596 |
SEH10424.1 | SEH10423.1 | SAMN02745716_0275 | SAMN02745716_0274 | Predicted nuclease (RNAse H fold). | Hypothetical protein. | 0.773 |