STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH11310.1Heme exporter protein B. (226 aa)    
Predicted Functional Partners:
SEH11308.1
Heme exporter protein C.
 
 0.999
SEH15772.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.904
SEH11313.1
Heme exporter protein A.
    
  0.859
SEH15770.1
Cytochrome c-type biogenesis protein CcmF.
 
  
 0.820
SEH16248.1
Cytochrome c-type biogenesis protein CcmF.
 
  
 0.820
SEH11298.1
Uroporphyrinogen III methyltransferase / synthase.
       0.811
SEH11304.1
Hypothetical protein.
       0.799
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.781
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.780
SEH11317.1
Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
       0.769
Your Current Organism:
Thermoleophilum album
NCBI taxonomy Id: 29539
Other names: ATCC 35263, T. album, Thermoleiphilum album, strain HS-5
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