STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH11995.1Glyoxylase, beta-lactamase superfamily II. (465 aa)    
Predicted Functional Partners:
rpsQ
Ribosomal protein uS17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.979
SEH12711.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
  
 0.918
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.898
SEH15439.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.883
SEH12386.1
Acyl carrier protein.
  
 
 0.873
rsmH
16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
   
   0.873
SEH14007.1
Conserved hypothetical protein, steroid delta-isomerase-related.
 
  0.868
SEH14081.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 
 0.864
SEH13863.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
  
 0.863
SEH14095.1
Glyoxylase, beta-lactamase superfamily II.
  
 
0.859
Your Current Organism:
Thermoleophilum album
NCBI taxonomy Id: 29539
Other names: ATCC 35263, T. album, Thermoleiphilum album, strain HS-5
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