STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH14107.1HD domain-containing protein; Manually curated. (269 aa)    
Predicted Functional Partners:
SEH10384.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.972
SEH15456.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.967
SEH10344.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.961
SEH13734.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.950
SEH10323.1
Diguanylate cyclase, GGDEF domain.
 
  0.939
SEH11629.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.890
SEH11626.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.858
SEH10363.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.785
SEH10952.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.761
SEH13869.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.755
Your Current Organism:
Thermoleophilum album
NCBI taxonomy Id: 29539
Other names: ATCC 35263, T. album, Thermoleiphilum album, strain HS-5
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