STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH15629.1Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. (562 aa)    
Predicted Functional Partners:
SEH15623.1
Methionyl-tRNA formyltransferase.
 
 0.993
SEH12389.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.950
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.936
SEH12345.1
Short-chain dehydrogenase.
 
 
 0.930
SEH15633.1
D-alanine--poly(phosphoribitol) ligase, subunit 2.
  
 0.929
SEH12375.1
[acyl-carrier-protein] S-malonyltransferase.
   
 0.927
SEH15524.1
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase.
 
 
 0.924
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
 
 
  0.922
SEH14510.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
 
 
  0.920
SEH10234.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
  0.913
Your Current Organism:
Thermoleophilum album
NCBI taxonomy Id: 29539
Other names: ATCC 35263, T. album, Thermoleiphilum album, strain HS-5
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