Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C481_00435COG1832 Predicted CoA-binding protein. (140 aa)    
Predicted Functional Partners:
C481_16997
COG2873 O-acetylhomoserine sulfhydrylase.
   
  0.691
C481_18375
COG2873 O-acetylhomoserine sulfhydrylase.
   
  0.597
C481_11929
Hypothetical protein; COG0640 Predicted transcriptional regulators.
  
    0.589
C481_19886
Hypothetical protein.
  
    0.589
C481_00430
Arsenic resistance protein ArsA; COG0003 Oxyanion-translocating ATPase.
       0.515
C481_07081
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
   
  0.475
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
    
  0.455
C481_03412
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
   
  0.432
C481_01907
6-phosphogluconolactonase; COG2706 3-carboxymuconate cyclase.
    
  0.409
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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