Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_00535COG3250 Beta-galactosidase/beta-glucuronidase. (1068 aa)    
Predicted Functional Partners:
C481_00540
Glycoside hydrolase family protein; COG3250 Beta-galactosidase/beta-glucuronidase.
  
  0.993
C481_13959
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
 
  
 0.873
C481_00165
alpha-N-arabinofuranosidase; COG3534 Alpha-L-arabinofuranosidase.
  
  
  0.818
C481_01687
Hypothetical protein.
   
 0.722
C481_05605
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
 
 0.647
C481_01922
Glycoside hydrolase family 4; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
 
  
 0.646
C481_06015
Nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase.
     
 0.643
C481_03932
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
 
 0.639
C481_04286
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
 
 0.636
C481_01632
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
 
 0.630
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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