STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_00770ABC-2 type transporter; COG0842 ABC-type multidrug transport system, permease component. (256 aa)    
Predicted Functional Partners:
C481_00775
Daunorubicin resistance ABC transporter ATPase subunit; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.956
C481_15430
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.800
C481_15945
ABC transporter ATPase; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.769
C481_17472
COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.741
C481_11660
COG0842 ABC-type multidrug transport system, permease component.
  
  
  0.647
C481_07141
COG0778 Nitroreductase.
 
  
 0.645
C481_11665
COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.606
C481_19620
Nitroreductase family protein; COG0778 Nitroreductase.
  
  
 0.595
C481_08466
Hypothetical protein.
  
  
 0.568
C481_02102
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
  0.540
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.