STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_00935COG2610 H+/gluconate symporter and related permeases. (472 aa)    
Predicted Functional Partners:
C481_04231
6-phosphogluconate dehydrogenase-like protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NAD to NADH.
 
  
 0.582
C481_00930
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.565
C481_00950
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
    0.449
C481_00925
Oxidoreductase domain protein; COG0673 Predicted dehydrogenases and related proteins.
       0.440
C481_00940
COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
       0.431
C481_00945
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.431
C481_00955
Extracellular solute-binding protein family 5; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
    0.416
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.