Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_01485ABC transporter integral membrane subunit; COG0395 ABC-type sugar transport system, permease component. (309 aa)    
Predicted Functional Partners:
C481_01490
COG1175 ABC-type sugar transport systems, permease components.
 
 0.986
C481_00565
COG1175 ABC-type sugar transport systems, permease components.
 
 0.946
C481_10255
COG1175 ABC-type sugar transport systems, permease components.
 
 0.945
C481_00470
COG1175 ABC-type sugar transport systems, permease components.
 
 0.912
C481_02217
Binding-protein-dependent transport system inner membrane protein; COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
 
 0.911
C481_15630
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components; overlaps another CDS with the same product name.
 
 0.911
C481_01722
COG1175 ABC-type sugar transport systems, permease components.
 
 0.910
C481_00175
ABC transporter integral membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
 0.908
C481_01005
COG1175 ABC-type sugar transport systems, permease components.
 
 0.894
C481_11814
COG1175 ABC-type sugar transport systems, permease components.
 
 0.893
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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