STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_01510TrkA-N domain protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters. (642 aa)    
Predicted Functional Partners:
C481_09223
Trk system potassium uptake protein TrkH; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.972
C481_09238
Cation transporter; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.969
C481_12594
Cation transporter; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.969
C481_12879
Sodium/hydrogen exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
   
 0.922
C481_05755
NADH/Ubiquinone/plastoquinone; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
     
 0.858
C481_06322
COG2116 Formate/nitrite family of transporters.
  
 
 0.803
C481_09258
COG0531 Amino acid transporters.
  
 
 0.803
C481_09263
COG0531 Amino acid transporters.
  
 
 0.803
C481_09742
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
   
 
 0.772
C481_02352
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
   
 
 0.771
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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