STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_01547ABC-2 type transporter; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (266 aa)    
Predicted Functional Partners:
C481_01552
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.634
C481_01542
Hypothetical protein; COG1361 S-layer domain.
       0.509
C481_06442
TOBE domain-containing protein; COG0583 Transcriptional regulator.
  
     0.478
C481_02102
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.475
C481_18650
Daunorubicin resistance ABC transporter ATPase; COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.456
C481_02342
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.450
C481_01537
COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.432
C481_05680
Patched family protein; COG1033 Predicted exporters of the RND superfamily.
  
     0.428
C481_11400
COG1817 Uncharacterized protein conserved in archaea.
  
     0.426
C481_20106
Hypothetical protein; COG0730 Predicted permeases.
  
     0.414
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.