Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_01697PKD domain containing protein; COG3979 Uncharacterized protein contain chitin-binding domain type 3. (369 aa)    
Predicted Functional Partners:
C481_01702
Glycoside hydrolase family 18; COG3979 Uncharacterized protein contain chitin-binding domain type 3.
 
    
0.788
C481_05875
COG1122 ABC-type cobalt transport system, ATPase component.
   
    0.611
C481_09332
Binding-protein-dependent transport system inner membrane protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II; overlaps another CDS with the same product name.
  
    0.591
C481_11884
MaoC domain-containing protein dehydratase; COG2030 Acyl dehydratase.
   
    0.551
C481_01707
Glycoside hydrolase family 18; COG3979 Uncharacterized protein contain chitin-binding domain type 3.
 
    
0.492
C481_03097
COG1454 Alcohol dehydrogenase, class IV.
   
    0.460
C481_13689
COG1454 Alcohol dehydrogenase, class IV.
   
    0.460
C481_00975
COG1472 Beta-glucosidase-related glycosidases.
  
  
  0.452
C481_10540
COG1169 Isochorismate synthase.
  
  
  0.436
C481_14808
Subtilase family protein; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
 
 0.436
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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