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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_01802COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase. (767 aa)    
Predicted Functional Partners:
C481_01807
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; overlaps another CDS with the same product name.
 
 0.978
C481_01812
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; overlaps another CDS with the same product name.
 
 0.975
C481_05880
Cobalt transporter.
  
 0.938
C481_07566
COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
 
0.907
C481_00945
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.905
C481_02432
ABC transporter integral membrane subunit; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.905
C481_18910
ABC transporter integral membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.905
C481_14054
Binding-protein-dependent transport system inner membrane protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.904
C481_14059
Binding-protein-dependent transporters inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.904
C481_14034
Binding-protein-dependent transport system inner membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.899
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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