STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_02027Terminal quinol oxidase subunit; COG2259 Predicted membrane protein. (130 aa)    
Predicted Functional Partners:
C481_14548
Integrase family protein; COG0582 Integrase.
  
     0.593
C481_05370
Type 11 methyltransferase; COG0500 SAM-dependent methyltransferases.
  
     0.517
C481_06172
ArsR family transcriptional regulator; COG3398 Uncharacterized protein conserved in archaea.
  
     0.479
C481_02022
Hypothetical protein; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
       0.477
C481_05645
Hypothetical protein.
  
     0.458
C481_12704
Type II secretion system protein F; COG2064 Flp pilus assembly protein TadC.
  
     0.452
C481_16512
Abortive infection protein; COG2264 Ribosomal protein L11 methylase.
  
     0.437
C481_02032
Putative ArsR family transcriptional regulator; COG0640 Predicted transcriptional regulators.
       0.430
C481_16442
COG3269 Predicted RNA-binding protein, contains TRAM domain.
  
     0.418
C481_16010
Kinetochore-Ndc80 complex subunit Spc25; COG0419 ATPase involved in DNA repair.
  
     0.409
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.