STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_02062Sodium/hydrogen exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters. (425 aa)    
Predicted Functional Partners:
C481_18765
Phosphodiesterase; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
  
 
 
 0.664
C481_15895
COG1257 Hydroxymethylglutaryl-CoA reductase.
 
   
 0.623
C481_18620
COG1100 GTPase SAR1 and related small G proteins.
   
 0.612
rps5p
30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
 
     0.588
C481_02067
Hypothetical protein.
       0.559
C481_12879
Sodium/hydrogen exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
  
   
0.451
C481_02057
D12 class N6 adenine-specific DNA methyltransferase; COG0338 Site-specific DNA methylase.
       0.448
C481_19065
Membrane associated potassium channel; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
   
 0.439
C481_20046
Ion transport 2 domain protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
   
 0.429
C481_06322
COG2116 Formate/nitrite family of transporters.
 
 
 
 0.428
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.