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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_02192Peptidase M24; COG0006 Xaa-Pro aminopeptidase. (424 aa)    
Predicted Functional Partners:
C481_01220
Creatinine amidohydrolase; COG1402 Uncharacterized protein, putative amidase.
  
  
  0.546
C481_07481
Ethyl tert-butyl ether degradation EthD.
  
     0.519
C481_07486
Metal dependent phosphohydrolase; COG3481 Predicted HD-superfamily hydrolase.
  
     0.508
C481_18505
Dimethylglycine dehydrogenase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.458
C481_20566
Integrase family protein; COG0582 Integrase.
  
     0.453
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.440
C481_20641
COG3316 Transposase and inactivated derivatives.
  
     0.439
C481_03267
Integrase family protein; COG0582 Integrase.
  
     0.428
C481_12484
Peptidase M24; COG0006 Xaa-Pro aminopeptidase.
  
     0.414
C481_16987
Hypothetical protein; COG3211 Predicted phosphatase.
  
     0.405
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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