Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_02197Hypothetical protein. (501 aa)    
Predicted Functional Partners:
C481_13804
Lipoprotein.
  
  
 0.678
C481_06015
Nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.450
C481_10540
COG1169 Isochorismate synthase.
     
  0.444
C481_04021
Peptidase M50; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
      
 0.430
C481_00775
Daunorubicin resistance ABC transporter ATPase subunit; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.424
C481_01205
COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.424
C481_01537
COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.424
C481_02102
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.424
C481_02902
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.424
C481_03797
Copper ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.424
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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