STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_02462Hypothetical protein. (471 aa)    
Predicted Functional Partners:
C481_15150
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
  
     0.689
C481_16010
Kinetochore-Ndc80 complex subunit Spc25; COG0419 ATPase involved in DNA repair.
  
     0.658
C481_02457
Hypothetical protein; COG1988 Predicted membrane-bound metal-dependent hydrolases.
       0.636
leuS-3
COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.635
C481_00665
Hypothetical protein.
  
     0.634
C481_11345
COG2348 Uncharacterized protein involved in methicillin resistance.
  
     0.623
C481_14548
Integrase family protein; COG0582 Integrase.
  
     0.614
C481_18780
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
     0.591
C481_11415
Hypothetical protein.
  
     0.585
C481_02527
HTH DNA-binding protein; COG3413 Predicted DNA binding protein.
  
     0.574
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.