STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_03097COG1454 Alcohol dehydrogenase, class IV. (437 aa)    
Predicted Functional Partners:
C481_19795
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
 
 0.942
C481_03102
Beta-lactamase domain-containing protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
 
 
 0.873
C481_03017
Alcohol dehydrogenase GroES domain protein; COG1064 Zn-dependent alcohol dehydrogenases.
  
 0.856
C481_06462
COG1064 Zn-dependent alcohol dehydrogenases.
  
 0.856
C481_06946
Alcohol dehydrogenase zinc-binding domain-containing protein; COG1064 Zn-dependent alcohol dehydrogenases.
  
 0.856
C481_02702
CoA-binding domain-containing protein; COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.822
C481_10975
CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.822
C481_11405
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
     
 0.788
gldA
COG0371 Glycerol dehydrogenase and related enzymes.
 
 
 0.748
C481_19565
Hypothetical protein; COG0247 Fe-S oxidoreductase.
    
 0.705
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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