STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_03212COG0492 Thioredoxin reductase. (351 aa)    
Predicted Functional Partners:
C481_03207
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.882
C481_04521
UBA/THIF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
  
 0.636
C481_18005
COG0520 Selenocysteine lyase.
  
 
  0.630
C481_20196
COG0520 Selenocysteine lyase.
  
 
  0.629
C481_14109
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase.
  
  
 
0.601
C481_03412
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
   
 
 0.519
C481_07081
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
   
 
 0.519
C481_20231
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase.
  
  
 
0.513
C481_10760
Redoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.512
C481_20221
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.500
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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