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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_03332Pyrrolo-quinoline quinone; COG1520 FOG: WD40-like repeat. (350 aa)    
Predicted Functional Partners:
C481_19896
Integrase family protein; COG0582 Integrase.
  
     0.675
C481_05585
Metallophosphoesterase; COG2129 Predicted phosphoesterases, related to the Icc protein.
  
     0.660
C481_04746
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
  
     0.637
C481_18175
Hypothetical protein; COG1357 Uncharacterized low-complexity proteins.
  
     0.635
C481_16070
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.629
C481_20641
COG3316 Transposase and inactivated derivatives.
  
     0.627
C481_11545
Hypothetical protein.
  
     0.609
C481_08993
COG3413 Predicted DNA binding protein.
  
     0.603
C481_11380
COG0726 Predicted xylanase/chitin deacetylase.
  
     0.599
C481_20566
Integrase family protein; COG0582 Integrase.
  
     0.594
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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