STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_03412COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. (370 aa)    
Predicted Functional Partners:
C481_18660
COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
 
 0.951
C481_12444
Pyridoxal-5'-phosphate-dependent protein subunit beta; COG0031 Cysteine synthase.
 
 0.935
katG
Catalase/hydroperoxidase HPI(I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
 0.930
C481_18760
COG1045 Serine acetyltransferase.
  
 
 0.930
C481_13344
COG0031 Cysteine synthase.
 
 0.928
C481_07126
COG0620 Methionine synthase II (cobalamin-independent).
  
 
 0.826
C481_11924
COG3620 Predicted transcriptional regulator with C-terminal CBS domains.
  
 
 0.824
C481_13939
COG0460 Homoserine dehydrogenase.
  
 
 0.821
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.741
C481_00640
COG0620 Methionine synthase II (cobalamin-independent).
  
 
 0.738
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.