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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_03492Glycosyl transferase group 1 protein; COG0438 Glycosyltransferase. (363 aa)    
Predicted Functional Partners:
C481_06015
Nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase.
 
  
 0.650
C481_18765
Phosphodiesterase; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
    
 0.541
C481_06027
UDP-glucuronate 5'-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
  0.511
C481_09902
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.499
C481_06032
Nucleotidyl transferase; COG1209 dTDP-glucose pyrophosphorylase.
 
 0.496
C481_08938
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.496
C481_09917
Nucleotidyl transferase; COG1209 dTDP-glucose pyrophosphorylase.
 
 0.496
C481_07541
Helix-hairpin-helix motif protein; COG1948 ERCC4-type nuclease.
  
 
  0.481
C481_09867
Glycosyltransferase, type 1; COG0438 Glycosyltransferase.
  
     0.474
C481_00750
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.469
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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