Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_04026COG1695 Predicted transcriptional regulators. (174 aa)    
Predicted Functional Partners:
C481_04031
Chlorite dismutase.
       0.910
C481_00775
Daunorubicin resistance ABC transporter ATPase subunit; COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.680
C481_08176
COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.680
C481_14858
COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.680
C481_15430
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.680
C481_15945
ABC transporter ATPase; COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.680
C481_17472
COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.680
C481_00770
ABC-2 type transporter; COG0842 ABC-type multidrug transport system, permease component.
 
     0.528
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.462
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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