Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_04031Chlorite dismutase. (512 aa)    
Predicted Functional Partners:
C481_18985
COG0181 Porphobilinogen deaminase.
 
   
 0.928
C481_19010
COG0113 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
     
 0.914
C481_04026
COG1695 Predicted transcriptional regulators.
       0.910
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
 0.906
C481_07931
Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
  
  
 0.889
C481_04021
Peptidase M50; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
       0.811
C481_18350
COG0539 Ribosomal protein S1.
   
 
 0.793
C481_20081
Hypothetical protein; COG2132 Putative multicopper oxidases.
   
 
 0.793
C481_01360
Hypothetical protein.
      
 0.640
C481_07276
Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
  
     0.589
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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