STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_04331COG1957 Inosine-uridine nucleoside N-ribohydrolase. (313 aa)    
Predicted Functional Partners:
C481_04636
COG0572 Uridine kinase.
   
 0.675
C481_15015
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
  
 0.673
C481_07786
COG0295 Cytidine deaminase.
   
 0.642
C481_15785
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
 
 0.630
C481_06422
PP-loop domain-containing protein; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control.
  
 0.614
C481_03082
COG0647 Predicted sugar phosphatases of the HAD superfamily.
 
  
 0.581
thrS
COG0441 Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
  0.573
C481_04336
Hypothetical protein.
       0.555
C481_17197
Isochorismatase hydrolase; COG1335 Amidases related to nicotinamidase.
  
  
 0.542
C481_14084
Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown.
 
  
 0.525
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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