STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_04331COG1957 Inosine-uridine nucleoside N-ribohydrolase. (313 aa)    
Predicted Functional Partners:
C481_15015
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
  
 0.832
C481_07786
COG0295 Cytidine deaminase.
   
 0.825
C481_06422
PP-loop domain-containing protein; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control.
  
  0.824
C481_04636
COG0572 Uridine kinase.
   
 0.822
C481_14084
Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown.
 
  
 0.798
C481_12824
Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown.
 
  
 0.793
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
  
 0.789
C481_11265
COG0167 Dihydroorotate dehydrogenase.
     
 0.782
thrS
COG0441 Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
    
  0.772
C481_06242
COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins.
    
 0.763
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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