Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_04516Hypothetical protein. (322 aa)    
Predicted Functional Partners:
C481_04661
COG1300 Uncharacterized membrane protein.
  
     0.571
C481_05170
COG4689 Acetoacetate decarboxylase.
  
     0.567
C481_19680
Hypothetical protein.
  
     0.553
C481_04511
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.544
C481_13199
Hypothetical protein.
  
     0.507
C481_13614
Bacterio-opsin activator HTH domain protein; COG3413 Predicted DNA binding protein.
  
     0.507
C481_10285
PA-phosphatase-like phosphoesterase; COG0671 Membrane-associated phospholipid phosphatase.
 
     0.506
C481_09727
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
  
     0.503
C481_12394
Phosphoesterase PA-phosphatase-like protein; COG0671 Membrane-associated phospholipid phosphatase.
 
     0.487
C481_15865
2-component system sensor kinase.
  
     0.479
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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