Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_04531Peptidase M24. (454 aa)    
Predicted Functional Partners:
C481_04526
UvrD/REP helicase; COG0210 Superfamily I DNA and RNA helicases.
 
     0.910
C481_10485
Hypothetical protein.
 
     0.613
C481_18460
Nitrogen specific signal transduction histidine kinase NtrB; COG2203 FOG: GAF domain.
  
     0.609
C481_13199
Hypothetical protein.
  
     0.569
C481_05230
Regulatory protein ArsR; COG0640 Predicted transcriptional regulators.
  
     0.543
C481_04051
Hypothetical protein.
  
     0.523
C481_05860
Hypothetical protein.
  
     0.510
C481_18435
Hypothetical protein.
  
     0.508
C481_16882
Cupin; COG0662 Mannose-6-phosphate isomerase.
  
     0.507
C481_13084
PAS/PAC sensor protein; COG2203 FOG: GAF domain.
  
     0.490
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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