Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_04576COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (368 aa)    
Predicted Functional Partners:
rpl37e
50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
    
 0.769
C481_17157
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
  0.641
C481_19210
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
  0.641
C481_04591
Transferase hexapeptide repeat containing protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
    0.620
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
   
 0.600
C481_03432
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.584
C481_14089
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 0.582
C481_08031
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 0.578
C481_08531
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 0.571
C481_04571
Sodium symporter; COG0385 Predicted Na+-dependent transporter.
       0.561
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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