STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_04576COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (368 aa)    
Predicted Functional Partners:
rpl37e
50S ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
    
 0.891
C481_15980
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
   0.655
C481_03432
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.639
C481_14089
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 0.637
C481_08031
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 0.633
C481_08531
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
 0.627
C481_13959
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
  
  
 0.593
C481_16827
COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
0.579
C481_04571
Sodium symporter; COG0385 Predicted Na+-dependent transporter.
       0.561
C481_05023
COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
 0.558
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.