Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_04783COG1522 Transcriptional regulators. (153 aa)    
Predicted Functional Partners:
C481_02702
CoA-binding domain-containing protein; COG1042 Acyl-CoA synthetase (NDP forming).
  
  
  0.772
C481_10975
CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming).
     
  0.739
C481_02382
COG1522 Transcriptional regulators.
  
   
 0.722
C481_09452
COG1522 Transcriptional regulators.
  
   
 0.666
C481_17497
COG1522 Transcriptional regulators.
  
     0.662
C481_04778
COG0174 Glutamine synthetase.
     
 0.654
C481_15670
COG1522 Transcriptional regulators.
  
   
 0.638
C481_09417
COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains.
      
 0.565
C481_10245
COG1378 Predicted transcriptional regulators.
  
   
 0.531
C481_13819
COG1522 Transcriptional regulators.
  
   
0.522
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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