STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps9pCOG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (132 aa)    
Predicted Functional Partners:
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 0.999
rpl40e
COG1552 Ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
 
 0.999
rps6e
COG2125 Ribosomal protein S6E (S10); Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.999
rps24e
COG2004 Ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.999
eif5a
Translation initiation factor IF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
 
 
 0.999
rpl15e
COG1632 Ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 0.999
rpl24e
50S ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.
  
 0.999
rps28e
COG2053 Ribosomal protein S28E/S33; Belongs to the eukaryotic ribosomal protein eS28 family.
  
 0.999
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
 0.999
rps2P
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 0.999
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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