STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_06936Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (168 aa)    
Predicted Functional Partners:
C481_14099
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase.
 
  
  0.527
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
  
  0.521
C481_06941
Hypothetical protein.
       0.520
C481_13939
COG0460 Homoserine dehydrogenase.
    
  0.465
C481_06931
Bacterio-opsin activator HTH domain-containing protein; COG3413 Predicted DNA binding protein.
       0.442
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.